FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11174145
Sequences flagged as poor quality0
Sequence length58-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG44300.011.241568120
TGGTCGC240850.09.042998120
GGTCGCC235400.08.971989120
ATCTCGG433750.08.908383120
TCTCGGT397200.08.610297120
GATCTCG464350.08.579761120
GTGGTCG266500.08.5103445120
GGTGGTC302650.08.346299120
AGATCTC490450.08.184344120
CTCGGTG376800.08.15289120
GTCGCCG235200.08.137778120
TAGATCT507450.08.063872120
CGGTGGT348000.08.017265120
GAGTGTA725350.07.99892120
GTAGATC643100.07.8090725120
AGTGTAG680750.07.7738013120
TCGGTGG358250.07.70414120
AAAAAAA585500.07.6755133120
GTGTAGA656850.07.4172397120
AAGAGTG854850.07.264454120
Produced by FastQC (version 0.11.5)