FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13249577
Sequences flagged as poor quality0
Sequence length55-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT465550.09.355549120
GTGGTCG242400.09.33056120
TCTCGGT364850.09.273928120
GATCTCG445750.08.977046120
AGATCTC448550.08.974507120
ATCTCGG401600.08.843557120
CGGTGGT324700.08.683895120
CTCGGTG349750.08.610829120
TGGTCGC221200.08.543275120
AGTGTAG625650.08.495741120
GTGTAGA606900.08.38258120
GGTCGCC227950.08.290295120
TCGGTGG325550.08.27423120
GGTGGTC277250.08.1793585120
GAGTGTA672200.08.1126795120
GCGTCGG81600.08.087262120
AGAGTGT727250.08.043033120
GTAGATC603500.07.932765120
AAGAGTG797650.07.7769113120
TGTAGAT635600.07.3244796120
Produced by FastQC (version 0.11.5)