FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18454312
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT581450.08.151437120
GGTGGTC480700.07.5758967120
TGGTCGC403050.07.532013120
TAGATCT701800.07.4032774120
GATCTCG708950.07.3032255120
GTGGTCG453850.07.283812120
AGATCTC693500.07.1977425120
GTGTAGA886350.07.1952767120
ATCTCGG629800.07.1446023120
CGTATCA265950.07.038402120
AGAGTGT1023850.07.031766120
TCGGTGG549750.07.006309120
CTCGGTG584250.06.9725323120
AGTGTAG899000.06.8938227120
GAGTGTA954650.06.887884120
GGTCGCC425300.06.7853017120
GTAGATC962950.06.6104517120
CGGTGGT541250.06.506684118-119
GTATCAT304900.06.395072120
CGCCGTA392150.06.3032494120
Produced by FastQC (version 0.11.5)