FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15054638
Sequences flagged as poor quality0
Sequence length59-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC552350.010.058458120
GTGGTCG614150.09.280769120
CGTATCA339250.08.842701120
AAAAAAA970800.08.806835120
CGCCGTA452300.08.728389120
GGTCGCC534150.08.682625120
TCGGTGG779750.08.640903120
GCGTCGG114700.08.578576120
GGTGGTC671100.08.573659120
ATCTCGG959150.08.500956120
CGGTGGT743800.08.340636120
CTCGGTG844250.08.201051120
CCGTATC404400.08.085748120
GCCGTAT426900.08.081212120
AGATCTC1058400.07.947545120
TCGCCGT526300.07.808938120
TAGATCT1113950.07.755889120
GTATCAT366550.07.725802120
TCTCGGT883700.07.6818485118-119
GATCTCG1014550.07.6464505120
Produced by FastQC (version 0.11.5)