FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13913324
Sequences flagged as poor quality0
Sequence length52-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC109300.018.6092593
CCGATCT115800.016.9947514
CTTCCGA129800.015.9475491
AAAAAAA1485750.014.1625395120
TTCCGAT172000.011.7557682
GCGTCGG141650.010.674193120
CGATCTA34800.010.3447875
CATTAAA500400.010.023977120
CGTATCA696350.09.753713120
TCATTAA520400.09.730972120
ATCATTA586400.09.669165120
GTATCAT662050.09.615584120
CCGTATC807900.09.49127120
GCCGTAT863950.09.063022120
CGCCGTA943250.08.930821120
TATCATT677750.08.835113120
GTGGTCG1310900.08.586465120
TGGTCGC1206100.08.541577120
GGTCGCC1153400.08.4584675120
GGTGGTC1393200.08.3031845120
Produced by FastQC (version 0.11.5)