FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13327909
Sequences flagged as poor quality0
Sequence length56-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT350150.08.972726120
TGGTCGC168500.08.894211120
GTGTAGA469950.08.555252120
GTGGTCG188050.08.545667120
TCTCGGT281450.08.532566120
GGTGGTC210050.08.51024120
ATCTCGG306900.08.491786120
AGATCTC340750.08.47839120
GATCTCG328550.08.316917120
CTCGGTG268300.08.277777120
GAGTGTA508950.08.077065120
AGTGTAG474500.07.984841118-119
GTAGATC453250.07.8346972120
TCGGTGG247600.07.730089120
AAGAGTG617000.07.6868615120
AGAGTGT554050.07.625989120
GTCGCCG192300.07.292638120
CGGTGGT242750.07.1057134118-119
TGTAGAT522250.07.0415907120
GTAGGGA889800.06.960349120
Produced by FastQC (version 0.11.5)