FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11254860
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG83100.010.564128120
GTGGTCG365250.08.593342120
TGGTCGC333250.08.588525120
AAAAAAA601750.08.513444120
CGGTGGT447950.08.308888120
TCGGTGG468950.08.218892120
GGTGGTC390800.08.2007675120
ATCTCGG584200.08.182526120
CTCGGTG511600.08.086111120
TCTCGGT531500.08.077496120
TAGATCT665950.07.927472120
CGTATCA215000.07.8307147120
GCCGTAT279800.07.671889120
GATCTCG638950.07.613133120
AGTGTAG858350.07.52353120
GTGTAGA832950.07.4497647120
AGATCTC643400.07.448333120
GGTCGCC332050.07.424414120
GTAGATC824600.07.364781120
CGCCGTA302400.07.3570166120
Produced by FastQC (version 0.11.5)