FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11889166
Sequences flagged as poor quality0
Sequence length52-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT474400.09.15588120
AGATCTC464050.09.075666120
TGGTCGC238500.08.753809120
GTGGTCG269900.08.602294120
AGAGTGT731600.08.40536120
TCTCGGT387500.08.360423120
GGTGGTC293650.08.33559120
TCGGTGG341600.08.09635120
AGTGTAG632150.08.076359120
ATCTCGG431600.08.020484120
GTGTAGA618150.08.01664120
CTCGGTG384800.08.013721120
GAGTGTA676950.07.914091120
CGGTGGT333400.07.8276224120
GTAGATC620350.07.756107120
TGTAGAT628150.07.506982120
GGTCGCC254650.07.4447412120
GATCTCG484650.07.414891120
AAGAGTG798500.07.37807120
AAAGAGT887150.06.9586425120
Produced by FastQC (version 0.11.5)