FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13197504
Sequences flagged as poor quality0
Sequence length60-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT477750.08.654264120
AGATCTC477750.08.47816120
TGGTCGC254050.08.39753120
GTGTAGA624100.08.165524120
TCTCGGT399350.08.141153120
TCGGTGG372650.08.095524120
GTGGTCG282600.08.059525120
ATCTCGG437150.07.945838120
GAGTGTA682700.07.816736120
AGTGTAG636800.07.7289987120
AAGAGTG804700.07.7145166120
GATCTCG498150.07.648416120
GTAGATC621350.07.6407003120
GGTGGTC313050.07.525143120
AGAGTGT737300.07.400891120
CGGTGGT363900.07.381895120
TGTAGAT638500.07.2189965120
GGTCGCC276100.07.1609707120
CTCGGTG417550.07.0235023120
GTATCAT186600.06.9563994120
Produced by FastQC (version 0.11.5)