FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14743674
Sequences flagged as poor quality0
Sequence length53-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG80950.09.858864120
GTGGTCG290200.09.470222120
TAGATCT552050.09.32612120
ATCTCGG474350.09.095407120
AGATCTC531600.08.827015120
TCGGTGG392350.08.793997120
CTCGGTG426450.08.667717120
TCTCGGT434700.08.641253120
AGTGTAG746450.08.400549120
TGGTCGC260350.08.366448120
GGTCGCC265450.08.341339120
GTAGATC715950.08.213636120
GAGTGTA801000.08.128105120
GTGTAGA727650.08.098062120
GGTGGTC338800.08.040897120
CGGTGGT389100.07.9575715120
AGAGTGT868400.07.946395120
GATCTCG524800.07.935198120
AAGAGTG955150.07.7084155120
CCCCTAG6655.2725954E-77.668502316-17
Produced by FastQC (version 0.11.5)