FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16060861
Sequences flagged as poor quality0
Sequence length53-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG79150.013.211031120
AAAAAAA1107750.010.741424120
TGGTCGC658150.08.984804120
GTGGTCG711000.08.578964120
CGCCGTA518350.08.556018120
GCCGTAT489800.08.257236120
GGTCGCC624600.08.207019120
CGTATCA429650.08.126429120
TCGGTGG909300.08.122376120
CCGTATC476150.08.0774555120
GGTGGTC781100.07.7859616120
GTCGCCG619400.07.771408120
CTCGGTG972800.07.586006120
TCTCGGT1010550.07.5702286120
ATCTCGG1088050.07.5612397120
GATCTCG1177650.07.475836120
CGGTGGT859450.07.47473120
TAGATCT1267500.07.4294972120
TCGCCGT590250.07.3657036118-119
AGATCTC1219200.07.092907120
Produced by FastQC (version 0.11.5)