FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11449839
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTCG362750.08.40244120
TAGATCT383000.08.396826120
AGATCTC368600.08.38303120
CTCGGTG295300.08.249197120
AGTGTAG504850.08.057799120
GGTCGCC201600.07.8868656120
GGTGGTC238800.07.8140316120
TCTCGGT302500.07.795003120
GTGGTCG215150.07.78058120
GAGTGTA537750.07.7544947120
GTGTAGA493600.07.7430735120
ATCTCGG332100.07.7325726120
TGTAGAT533750.07.486614120
AGAGTGT582050.07.4116974120
TCGGTGG280650.07.290183120
TGGTCGC198100.07.2387323120
GTAGATC480000.07.1249647120
AAGAGTG635700.06.908885120
CGGTGGT274700.06.8801985120
CGCCGTA191750.06.852639120
Produced by FastQC (version 0.11.5)