FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14508211
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT400750.07.762243120
AGATCTC469850.07.681504120
TAGATCT482900.07.4739165120
CTCGGTG390700.07.4239445120
GTGGTCG300250.07.3603044120
GGTGGTC321500.07.3594646120
AGTGTAG637500.07.319339120
GTAGATC621700.07.3025064120
GAGTGTA676900.07.2570443120
ATCTCGG438300.07.179444120
GATCTCG473450.07.128418120
CGGTGGT368050.07.081315120
TCGGTGG374350.07.0423512120
AGAGTGT722200.06.984781120
GTGTAGA624100.06.9505363118-119
TGTAGAT662650.06.9418554120
TGGTCGC274050.06.814933120
AAAAAAA623800.06.604041120
AAGAGTG784800.06.534764120
CGCCGTA261050.06.487187120
Produced by FastQC (version 0.11.5)