FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12790178
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC467050.09.349473120
GCGTCGG86200.09.267454120
TAGATCT486400.09.039274120
CTCGGTG369300.08.977922120
GATCTCG453550.08.687499120
TCTCGGT381850.08.604202120
GTAGATC637450.08.6028185120
GTGGTCG261650.08.516659120
ATCTCGG419500.08.461972120
GTGTAGA648350.08.43966120
AGTGTAG670350.08.404605120
TGGTCGC240300.08.348506120
TCGGTGG338350.08.307986120
GAGTGTA717700.08.30204120
GGTCGCC243300.08.270252120
GGTGGTC294600.08.094199120
TGTAGAT664150.08.076094120
AGAGTGT775100.07.966204120
CGGTGGT343350.07.889611120
AAGAGTG849050.07.7321978120
Produced by FastQC (version 0.11.5)