FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14041085
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT553500.09.5059120
GTGGTCG280950.09.502596120
GGTGGTC320550.09.432918120
ATCTCGG478000.09.237644120
TGGTCGC255900.09.143356120
AGATCTC528100.09.008828120
CGGTGGT371650.08.975362120
TCGGTGG384850.08.9325285120
TCTCGGT428950.08.923296120
CTCGGTG415250.08.668678120
TGTAGAT754800.08.2822275120
AGTGTAG745450.08.249291120
GATCTCG523050.08.178198120
GTGTAGA720850.08.139641120
AGAGTGT853800.07.954293120
GAGTGTA793700.07.951895120
GTAGATC714100.07.9309325120
AAGAGTG935500.07.862452120
GGTCGCC269450.07.7261405120
CGTATCA165500.07.6488433120
Produced by FastQC (version 0.11.5)