FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13888645
Sequences flagged as poor quality0
Sequence length56-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGATCT81600.020.0726264
TCCGATC96900.018.0177653
CTTCCGA110100.016.6205041
CGATCTA30100.013.7535345
TCTCGGG22700.012.158218120
AAAAAAA1651400.011.804168120
TTCCGAT164250.011.6159152
GCGTCGG77700.09.729432120
CGTATCA619000.09.07242120
CGCCGTA777850.08.86262120
GCCGTAT733850.08.838048120
CCGTATC690650.08.782762120
GGTCGCC947000.08.350326120
GTCGCCG917650.08.257797120
TGGTCGC1007600.08.229204120
TCGCCGT863650.08.128044120
GTATCAT640500.08.102797120
GTGGTCG1073150.07.8886833120
TCGGTGG1324400.07.733076120
TCATTAA580000.07.675627120
Produced by FastQC (version 0.11.5)