FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14564823
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG66350.015.110514120
TCGGTGG435350.09.77713120
TAGATCT635850.09.4227915120
CTCGGTG452500.09.247363120
GGTCGCC291500.09.082465120
GGTGGTC365550.09.065588120
GATCTCG561100.09.062476120
AGATCTC600800.09.003235120
ATCTCGG532600.08.927456120
TCTCGGT487750.08.689827120
GTGGTCG327600.08.649715120
AGTGTAG874500.08.430285120
GTAGATC816650.08.307037120
GTGTAGA838150.08.251529120
TGGTCGC297950.08.200771120
GAGTGTA941000.08.191796120
CGCCGTA267950.08.110703120
CGGTGGT430150.07.913468120
AGAGTGT1011250.07.836445120
TGTAGAT850900.07.7962804120
Produced by FastQC (version 0.11.5)