FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15414384
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG117950.013.836335120
AAAAAAA881850.09.076349120
CGTATCA329100.08.969895120
TCGGTGG739000.08.768583120
GTGGTCG579250.08.638734120
TGGTCGC533950.08.585052120
GGTGGTC641000.08.461757120
GGTCGCC525550.08.311271120
CGCCGTA462850.07.9982514120
GTATCAT355400.07.985348120
CTCGGTG789900.07.8389463120
GCCGTAT432450.07.825162120
CCGTATC406050.07.8167505120
AGATCTC996900.07.812197120
TCTCGGT820550.07.699644118-119
ATCTCGG896550.07.6894565120
CGGTGGT712750.07.6099415120
TAGATCT1040750.07.5349317120
GATCTCG976100.07.468478120
GTGTAGA1293000.07.3364077120
Produced by FastQC (version 0.11.5)