FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18442357
Sequences flagged as poor quality0
Sequence length55-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG366150.010.063861120
TGGTCGC332000.09.616761120
GCGTCGG85150.09.585384120
GGTGGTC420350.09.251652120
ATCTCGG620000.09.23447120
TCTCGGT567000.09.145047120
CTCGGTG532750.09.135928120
GGTCGCC315800.09.102877120
AGATCTC704000.08.899859120
GTCGCCG330550.08.860086120
GATCTCG666950.08.485427120
TAGATCT722100.08.394199120
CGGTGGT498000.08.26704120
AGTGTAG974700.08.145995120
TCGGTGG506850.08.11085120
GTAGATC926500.07.9220266120
GTGTAGA942200.07.8855658120
GAGTGTA1039300.07.6743097120
TGTAGAT984500.07.5955215120
TCGCCGT348900.07.5168476120
Produced by FastQC (version 0.11.5)