FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12278770
Sequences flagged as poor quality0
Sequence length64-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA640100.09.90743120
TGGTCGC411850.08.611311120
TCATTAA219850.08.229935120
GTGGTCG460000.08.206504120
ATCTCGG696700.07.9205117120
TAGATCT785050.07.794833120
CGTATCA280800.07.6423597120
AGATCTC756550.07.5402355120
GGTCGCC410700.07.5377120
CTCGGTG623750.07.526565120
GGTGGTC490850.07.517106118-119
TCGGTGG593000.07.491109120
ATCATTA248050.07.4881687120
GCGTCGG111850.07.416508120
TCTCGGT641100.07.351003120
GATCTCG737650.07.293383120
GTGTAGA983800.07.271039120
CGGTGGT559000.07.2585235120
GCCGTAT341550.07.198224120
GTATCAT292550.07.129937120
Produced by FastQC (version 0.11.5)