FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14346741
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCACAC178700.068.47771120
GAGCACA265600.043.804077120
AGAGCAC349800.033.896343118-119
AAGAGCA540650.022.646471120
GAAGAGC597550.019.89416118-119
GGAAGAG756950.016.238522120
ACACGTC79450.014.738438120
CGGAAGA886450.014.29886120
TCGGAAG873300.014.090741120
CACGTCT74500.012.362781118-119
GATCGGA1064350.012.217709120
ATCGGAA1055450.012.087164120
CACACGT58900.011.567991118-119
AGATCGG1160550.011.140055120
ACGTCTG91700.010.603964120
TAGATCG285200.010.408538118-119
CTAGATC67750.09.652536116-117
GCACACG87900.09.426397120
CGTCTGA109250.09.276614120
GAGATCG422000.08.584072118-119
Produced by FastQC (version 0.11.5)