FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11984581
Sequences flagged as poor quality0
Sequence length57-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA849450.010.142376120
CGCCGTA426950.08.993445120
GTATCAT360950.08.659919120
GCCGTAT404900.08.608975120
TCATTAA296650.08.494308120
CGTATCA336000.08.463896118-119
TGGTCGC524850.08.276114120
GTGGTCG565650.08.251919120
GGTCGCC501900.08.140536120
CCGTATC382550.07.904337120
TCGCCGT495800.07.768758120
GGTGGTC612300.07.701607120
ATCATTA344650.07.5550017120
GTCGCCG517800.07.531519118-119
CGGTGGT675550.07.513391120
CTCGGTG754050.07.288169120
TCGGTGG700250.07.0814304118-119
CATTAAA304950.06.944951120
TCTCGGT784500.06.8217373120
TATCATT423100.06.5512185120
Produced by FastQC (version 0.11.5)