FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16143872
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG79700.015.432634120
TGGTCGC286900.09.661753120
GTGGTCG322550.09.282139120
ATCTCGG522300.09.144029120
GGTCGCC278000.09.107772120
GATCTCG578650.09.062333120
TCGGTGG432250.09.022417120
TAGATCT622650.09.019374120
GTAGATC807600.08.915167120
GAGTGTA918950.08.7098055120
CTCGGTG457850.08.6883120
AGTGTAG852950.08.687362120
TCTCGGT480500.08.653352120
AGATCTC605350.08.57342120
GTGTAGA823900.08.24359120
GGTGGTC369800.08.1285925120
GTCGCCG287850.07.920669120
AGAGTGT989550.07.9186277120
AAGAGTG1085650.07.8863974120
TGTAGAT854350.07.8093247120
Produced by FastQC (version 0.11.5)