FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14421883
Sequences flagged as poor quality0
Sequence length54-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC375600.09.280588120
GGTCGCC364150.09.012223120
GGTGGTC439700.08.787277120
CGGTGGT498300.08.644872120
GTGGTCG404800.08.581496120
TCGGTGG528000.08.238138120
CTCGGTG578250.08.1240225120
CGTATCA251300.08.117295120
CGCCGTA345350.07.9219174120
TCTCGGT620000.07.770498120
CCGTATC297050.07.7356033120
CCCCCCG7000.00733705847.7144331
GCCGTAT327800.07.5590296120
AGATCTC732150.07.432453120
ATCTCGG668900.07.4177003120
TAGATCT767350.07.365163120
GATCTCG710250.07.3406324120
GTCGCCG399800.07.0530996120
TCGCCGT404600.06.954596120
GTGTAGA936550.06.886562120
Produced by FastQC (version 0.11.5)