FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14652890
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG101850.011.724674120
AAAAAAA955600.09.639198120
CGTATCA367500.08.507248120
TCGGTGG797550.08.502159120
GTGGTCG629450.08.475185120
GGTCGCC574300.08.463595120
TGGTCGC580250.08.314757120
CTCGGTG855750.08.141304120
GGTGGTC689400.08.112474120
CGGTGGT769500.07.9776635120
GCCGTAT468800.07.8466015120
CCGTATC446800.07.78975120
GTATCAT387650.07.7709236120
ATCTCGG968250.07.7283654120
TCTCGGT898050.07.6074862118-119
TCATTAA335200.07.5188947120
TAGATCT1131400.07.5155773120
CGCCGTA508100.07.4640856120
AGATCTC1081150.07.370906120
GATCTCG1052900.07.3520985120
Produced by FastQC (version 0.11.5)