FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13908131
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT356400.09.729825120
GCGTCGG89800.09.420146120
AGATCTC338100.09.369224120
GATCTCG329750.08.951487120
ATCTCGG329950.08.800596120
TGGTCGC180500.08.774888120
GAGTGTA544000.08.756619120
TCGGTGG254450.08.700391120
AGTGTAG502350.08.670519120
AGAGTGT599750.08.582858120
GGTGGTC208900.08.558402120
GTGGTCG195900.08.421959120
TCTCGGT293650.08.335756120
GTGTAGA499650.08.285106120
GTAGATC479100.08.264806120
CGGTGGT254200.08.142512120
AAGAGTG669200.08.140382120
TGTAGAT523750.07.9038725120
CTCGGTG280200.07.868762118-119
TAGGGAA943450.07.4910254120
Produced by FastQC (version 0.11.5)