FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15862561
Sequences flagged as poor quality0
Sequence length58-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1122450.010.685591120
GCGTCGG101900.010.491397120
TGGTCGC655600.08.18088120
GTGGTCG704200.07.9659643120
GTCGCCG648300.07.8931627120
GGTGGTC760600.07.8569546120
GGTCGCC637600.07.6488333120
CCGTATC519800.07.545089120
TCGGTGG885950.07.5113506120
GTATCAT456050.07.4935446120
CGTATCA441650.07.4658895120
CGCCGTA541350.07.433342120
GCCGTAT528800.07.3939586120
ATCTCGG1054900.07.344562120
TCTCGGT980600.07.2640743120
CTCGGTG928400.07.0708647120
CGGTGGT848850.07.0684147120
TAGATCT1199850.07.037945120
GATCTCG1132150.07.0184846120
TCGCCGT612300.06.915321120
Produced by FastQC (version 0.11.5)