FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12946060
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT307850.09.128285120
TAGATCT374100.08.9433155120
AGATCTC365600.08.789144120
GAGTGTA551550.08.455287120
ATCTCGG336550.08.439251120
GTGGTCG211900.08.434066120
AGTGTAG508700.08.173871120
GTGTAGA500450.08.080162120
CTCGGTG289350.08.048204120
GCGTCGG76450.08.028496120
TCGGTGG280950.07.967561120
GGTGGTC235100.07.883328120
TGTAGAT534950.07.862768120
TGGTCGC191500.07.8556614120
GATCTCG369400.07.722894118-119
AGAGTGT593400.07.7170024120
AAGAGTG660100.07.6118155120
GTAGATC515600.07.6093264120
CGGTGGT275700.07.268068120
GGGAAAG898600.07.0379767120
Produced by FastQC (version 0.11.5)