FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18042072
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC379150.09.433981120
TGGTCGC380650.09.286441120
GCGTCGG112500.09.068934120
GTGGTCG423300.08.761935120
CGTATCA252750.08.738089120
GGTGGTC471800.08.662615120
ATCTCGG670150.08.642017120
CTCGGTG594500.08.257741120
TCGGTGG549200.08.228568120
TAGATCT773500.08.216662120
TCTCGGT616300.08.17988120
AGATCTC751400.08.138845120
CGGTGGT537150.08.133841120
GATCTCG745200.07.948847120
AGTGTAG1018350.07.5670705120
GAGTGTA1079350.07.422989120
CGCCGTA353300.07.4063234120
GTAGATC1007200.07.3707867120
GTGTAGA990900.07.304279120
TCGCCGT418550.07.198072120
Produced by FastQC (version 0.11.5)