FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12742831
Sequences flagged as poor quality0
Sequence length60-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC281100.08.986813120
AGTGTAG390900.08.887862120
GAGTGTA422850.08.869071120
TAGATCT283400.08.680974120
GTGTAGA381850.08.187085120
AAGAGTG521100.08.152609120
AGAGTGT463750.08.125689120
GTAGATC378050.08.04717120
GATCTCG286950.07.7998643120
TAGGGAA735800.07.6738667120
TGTAGAT412550.07.5923877120
TGTAGGG818950.07.429593120
CTCGGTG250400.07.4047194120
GTGGTCG174450.07.395234120
GGGAAAG701950.07.3857055120
ATCTCGG279150.07.3729434120
GTAGGGA768800.07.360084120
TCGGTGG223500.07.3562665120
TGGTCGC158800.07.217176120
AAAGAGT615150.07.0817404120
Produced by FastQC (version 0.11.5)