FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13575186
Sequences flagged as poor quality0
Sequence length51-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG67250.012.310618120
AAAAAAA708500.08.975509120
TGGTCGC409150.08.900189120
GTGGTCG441900.08.83792120
GGTGGTC491550.08.811757120
GGTCGCC389900.08.785691120
CTCGGTG611000.08.640414120
CGTATCA297150.08.257349120
ATCTCGG698900.08.249002120
GTCGCCG389250.08.183875120
GATCTCG736000.08.118478120
CGGTGGT565250.08.07676120
AGATCTC780200.08.066082120
GCCGTAT354650.08.051931120
TAGATCT819050.07.939843120
TCGGTGG587900.07.9186535120
TCTCGGT650750.07.789967120
TCGCCGT373650.07.594326120
CGCCGTA344200.07.4772086120
GAGTGTA1143350.07.1779423120
Produced by FastQC (version 0.11.5)