FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15223600
Sequences flagged as poor quality0
Sequence length52-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC317100.08.136223120
TCTCGGT498400.08.125992120
TAGATCT606700.08.069875120
AGATCTC597450.07.9136214120
CTCGGTG486850.07.7641873120
GTGGTCG358450.07.7500243120
AGTGTAG783250.07.7216616120
TCGGTGG446450.07.6201034120
CGTATCA218250.07.5601273120
ATCTCGG552100.07.4008226120
GGTGGTC385950.07.322181120
GAGTGTA831950.07.2912927120
GGTCGCC341450.07.2748466120
GTAGATC790200.07.258911120
CGGTGGT431550.07.229743120
GCGTCGG113950.07.21368120
GTGTAGA770950.07.183335120
GATCTCG626050.07.149578120
AGAGTGT896300.07.0690517120
CGCCGTA298300.06.899085120
Produced by FastQC (version 0.11.5)