FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11708602
Sequences flagged as poor quality0
Sequence length72-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT295500.09.40022120
CTCGGTG220150.08.993107120
ATCTCGG256450.08.819687120
GAGTGTA434850.08.595342120
AGTGTAG410650.08.517483120
GATCTCG278600.08.398428120
TCTCGGT231000.08.388902120
GTAGATC404200.08.312014120
GTGGTCG158350.08.297373120
AGATCTC284950.08.274436120
TCGGTGG209450.08.249481120
GGTCGCC147350.08.183903120
AGAGTGT473050.08.091483120
AAGAGTG527100.07.9333076120
GTGTAGA396700.07.8793435120
GGTGGTC179500.07.787642120
TGGTCGC147600.07.519689118-119
TGTAGAT434200.07.2679253120
GTAGGGA775200.07.197534120
CGGTGGT215100.07.140261120
Produced by FastQC (version 0.11.5)