FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10863342
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC273700.08.418039120
GGTCGCC267900.08.33153120
GTGGTCG294500.08.006851120
TAGATCT495000.07.951575120
AAAAAAA556150.07.951152120
GGTGGTC317800.07.7030153120
CGTATCA191950.07.595785120
TCGGTGG373500.07.550257120
GCGTCGG68550.07.5274086120
GTAGATC604900.07.3996263120
ATCTCGG446250.07.2471137120
AGATCTC477650.07.1852317120
GATCTCG468650.07.143978120
CTCGGTG393600.07.0732236120
GTCGCCG295050.06.9954767120
TCTCGGT416950.06.9073553120
GTGTAGA627450.06.846812120
CGGTGGT363600.06.7987313120
GCCGTAT253000.06.7115126120
TGTAGAT636800.06.64793118-119
Produced by FastQC (version 0.11.5)