FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14619968
Sequences flagged as poor quality0
Sequence length65-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG397250.010.119023120
TGGTCGC358500.09.455554120
GGTGGTC450200.09.395316120
ATCTCGG665200.09.23582120
GGTCGCC347100.09.143844120
CTCGGTG576950.09.088683120
TCGGTGG530950.09.07381120
TCTCGGT608300.08.955622120
GATCTCG718450.08.851912120
GTCGCCG358200.08.843742120
AGATCTC754800.08.799205120
TAGATCT791350.08.78704120
GTGTAGA1023600.08.370004120
CGCCGTA312250.08.358234120
CGGTGGT515450.08.3456545120
CGTATCA251850.08.337845120
GTAGATC988300.08.110458120
AGTGTAG1076000.07.9791217120
GAGTGTA1152150.07.9204144120
GCCGTAT308350.07.7440267120
Produced by FastQC (version 0.11.5)