FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14033359
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG85650.010.446419120
AAAAAAA915100.09.547793120
TGGTCGC494650.08.874174120
GGTGGTC584700.08.195556120
GTGGTCG533650.07.9893312120
TCGGTGG684250.07.9597797120
GGTCGCC477300.07.9134846120
GCCGTAT399800.07.8704042120
GTCGCCG488150.07.7252917120
CTCGGTG723350.07.6042356120
CGTATCA326100.07.488042118-119
TCTCGGT754550.07.4330564120
GATCTCG880600.07.432867120
AGATCTC912550.07.4161043120
TAGATCT946850.07.3947916120
ATCTCGG816250.07.3714533120
GTATCAT353600.07.3363504120
CGGTGGT658700.07.3113117120
CGCCGTA411700.07.307443120
GAGTGTA1280000.06.877531120
Produced by FastQC (version 0.11.5)