FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11467342
Sequences flagged as poor quality0
Sequence length55-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1602250.012.926805120
CATTACC66100.011.43720151
CCTAGAA13350.011.235941
CCTTACC38550.09.4941511
CCTTCAT104350.09.3147941
CGTATCA596900.09.298028120
CCGTATC664350.09.266188120
TCTCGGG19550.09.207149120
CCTTTAT118750.09.1452511
CGCCGTA773300.09.132278120
GTATCAT599450.09.118347120
CCTTAGT20450.09.0953431
TCATTAA505450.09.045393120
GCCGTAT713100.09.028175120
GCGTCGG66550.09.015765120
GGTCGCC941550.08.972427120
GTCGCCG902300.08.897251120
TGGTCGC1009800.08.841343120
CCTTCAC65900.08.8315521
GTGGTCG1089100.08.682386120
Produced by FastQC (version 0.11.5)