FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15058056
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC422750.010.345195120
TAGATCT448250.09.636226120
GGTGGTC265900.09.588824120
TGGTCGC223100.09.465375120
ATCTCGG396850.09.357483120
GATCTCG412350.09.354913120
TCGGTGG322900.09.308173120
TCTCGGT356800.08.961839120
CTCGGTG336300.08.687541120
GAGTGTA682050.08.619948120
AGTGTAG634650.08.5169735120
GTAGATC605900.08.485445120
GTGTAGA620650.08.457773120
AGAGTGT737050.08.2046175120
TGTAGAT636250.08.203256120
AAGAGTG822150.08.172628120
GTGGTCG244300.08.030065118-119
GGTCGCC229200.07.9832544120
CGGTGGT318650.07.9638157120
GTAGGGA1210250.07.138093120
Produced by FastQC (version 0.11.5)