FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15369263
Sequences flagged as poor quality0
Sequence length50-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGATCT109050.018.0460264
CGATCTA28750.017.9470865
CTTCCGA147550.015.28910351
TCCGATC134850.014.7713623
AAAAAAA2096600.013.707523120
GCGTCGG85950.012.285868120
TTCCGAT226100.010.6143362
GTATCAT938300.09.898474120
TCATTAA747750.09.644664120
CGTATCA961650.09.552064120
CCGTATC1071250.09.342095120
GCCGTAT1139850.09.31149120
ATCATTA842000.09.256271120
CGCCGTA1214200.09.200861120
CATTAAA730250.09.119908120
GTCGCCG1428000.08.852693120
GGTCGCC1500500.08.628881120
TCGCCGT1339700.08.513607120
TATCATT967500.08.440073120
TGGTCGC1603000.08.151986120
Produced by FastQC (version 0.11.5)