FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14730767
Sequences flagged as poor quality0
Sequence length57-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1222900.011.411225120
CGTATCA495700.09.440373120
TGGTCGC818000.09.175241120
GCGTCGG109500.09.040311120
GTGGTCG882150.08.93648120
GGTCGCC777800.08.608149120
GTATCAT507400.08.501429120
CCGTATC572100.08.3998995120
CGCCGTA679700.08.252924120
GGTGGTC962100.08.13774120
TCATTAA441500.08.112545120
CTCGGTG1212700.07.965004120
GTCGCCG793700.07.9292593120
TCGGTGG1112900.07.8005614120
CGGTGGT1059700.07.7732234120
GCCGTAT620950.07.748743120
TCGCCGT770750.07.5426464120
ATCATTA508250.07.377618120
CATTAAA440400.07.3290634120
ATCTCGG1353250.07.2796187120
Produced by FastQC (version 0.11.5)