FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19559012
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG88600.010.363816120
GTGGTCG459100.09.673562120
TGGTCGC416650.09.607635120
GGTCGCC398950.09.597634120
GGTGGTC509150.08.828727120
CTCGGTG644150.08.497083120
TCGCCGT421000.08.453462120
TCGGTGG609050.08.346271120
TCTCGGT686500.08.305104120
GTCGCCG404200.08.240598120
GATCTCG781650.08.084964120
ATCTCGG744000.08.042373120
CGCCGTA379800.07.9167104120
TAGATCT849500.07.827776120
AGATCTC827150.07.749059120
CGGTGGT600000.07.6019382120
CGTATCA309000.07.535902120
AGTGTAG1112050.07.17237120
GTAGATC1141850.06.8958335120
GAGTGTA1179100.06.8713984120
Produced by FastQC (version 0.11.5)