FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831306

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831306
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16224303
Sequences flagged as poor quality0
Sequence length56-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG312800.08.439882120
ATCTCGG477350.08.2832155120
TAGATCT529150.07.9032273120
TGGTCGC281200.07.873386120
GGTCGCC288400.07.7600417120
TCTCGGT438900.07.7101717120
AGTGTAG701350.07.6823134120
GGTGGTC338050.07.6674914120
AGATCTC514300.07.664774120
GTGTAGA683500.07.5669217120
CTCGGTG421250.07.3637853120
GATCTCG505200.07.351531118-119
GAGTGTA743400.07.336549120
GTAGATC680750.07.1832414120
CGGTGGT388000.07.0979257120
AGAGTGT803300.07.0733104120
GTCGCCG326800.06.9216523120
AAGAGTG878900.06.867664120
TCGGTGG396300.06.8584285118-119
GCGTCGG91400.06.695831120
Produced by FastQC (version 0.11.5)