FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11216518
Sequences flagged as poor quality0
Sequence length54-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG50500.013.902005120
GGTGGTC316900.012.288687120
CGGTGGT353800.011.278382120
GTGGTCG269100.011.059895120
CGTATCA159500.010.721787120
TCGGTGG378200.010.501884118-119
TGGTCGC239700.010.163446120
CTCGGTG411450.09.609462118-119
GGTCGCC232150.09.563481120
AGTGTAG797850.09.423513120
GTGTAGA758900.09.345788120
TCTCGGT432100.09.18496116-117
TGTAGAT780450.08.864765120
AGATCTC550800.08.726128120
CCGTATC188350.08.473186118-119
GAGTGTA852250.08.454865118-119
TAGATCT573650.08.368083120
GTCGCCG239200.08.353454120
GATCTCG515400.08.196176120
CGCCGTA194250.08.169517116-117
Produced by FastQC (version 0.11.5)