FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11808771
Sequences flagged as poor quality0
Sequence length57-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC393900.08.925515120
GGTCGCC385900.08.830703120
AAAAAAA650450.08.688777120
GTGGTCG427100.08.596933120
CGTATCA247350.08.368138120
GTATCAT259300.08.167589120
GCCGTAT321300.08.122696120
ATCTCGG650300.07.925033120
GGTGGTC465050.07.7792788120
CCGTATC304700.07.7776127120
TCGGTGG533450.07.726534120
CGGTGGT518400.07.649942120
TCATTAA223750.07.534682120
AGATCTC715150.07.516793120
TCTCGGT588250.07.4555054120
CGCCGTA344800.07.360288120
GATCTCG707400.07.2683764120
CTCGGTG573650.07.226911120
TAGATCT739250.07.166235120
GTAGATC880900.07.124047120
Produced by FastQC (version 0.11.5)