FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10970826
Sequences flagged as poor quality0
Sequence length58-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG317150.09.155768120
AAAAAAA466600.08.473344120
TGGTCGC289250.08.358837120
TCTCGGT455700.08.320553120
CTCGGTG443300.08.3096895120
AGATCTC542750.08.301456120
GGTCGCC294900.08.30041120
TCGGTGG405400.08.065418120
ATCTCGG494550.07.9338083120
TAGATCT560250.07.924357120
GGTGGTC353550.07.8567753120
GCGTCGG88300.07.7456574120
GATCTCG543900.07.677226120
CGTATCA189550.07.56464120
GTGTAGA709100.07.4792657120
GTAGATC729900.07.3647633120
TCATTAA152300.07.2482324120
AGTGTAG729300.07.2309747120
CCGTATC249500.07.165721120
CGGTGGT401100.07.134769120
Produced by FastQC (version 0.11.5)