FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13855248
Sequences flagged as poor quality0
Sequence length126
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG45300.015.630038120
TGGTCGC420100.09.255471120
GGTCGCC389350.09.138832120
TCGGTGG602750.09.019183120
GTCGCCG365350.08.983684120
GTGGTCG452600.08.895783120
CGCCGTA326300.08.771574120
ATCTCGG725800.08.581369120
TCGCCGT356250.08.505753120
AAAAAAA834250.08.472768120
CTCGGTG617550.08.365795120
GGTGGTC494350.08.314425120
GATCTCG756850.08.150036120
AGATCTC815950.08.125964120
CGGTGGT568100.08.122276120
TCTCGGT670000.08.051209120
CGTATCA321850.07.9979744120
TAGATCT869850.07.8224883120
GTGTAGA1101550.07.4898777120
GCCGTAT345850.07.381598118-119
Produced by FastQC (version 0.11.5)