FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11402518
Sequences flagged as poor quality0
Sequence length70-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA925650.09.442667120
CGTATCA293200.09.309566120
GCGTCGG70300.08.789494120
GCCGTAT367050.08.171969120
CGCCGTA395150.08.091838120
GGTCGCC454150.08.057726120
GTGGTCG500850.08.00112120
CCGTATC342850.07.9613957120
GTATCAT325900.07.9336834120
TGGTCGC464300.07.8169913118-119
GTCGCCG472550.07.782061120
CGGTGGT593950.07.544886120
GGTGGTC543650.07.3270755120
TCGGTGG619950.07.1800785120
TCGCCGT450550.06.8971353120
ATCTCGG733750.06.88408120
CTCGGTG657750.06.85411118-119
TCTCGGT683200.06.849024120
GATCTCG790400.06.679096120
AGATCTC806500.06.642461120
Produced by FastQC (version 0.11.5)