FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14610240
Sequences flagged as poor quality0
Sequence length56-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG90650.015.156948120
TCTCGGG35100.012.8203120
AAAAAAA1187300.011.0315695120
TGGTCGC761650.08.444684120
CCGTATC556750.08.384234120
GGTCGCC720600.08.376215120
CGTATCA483350.08.341643120
TCATTAA425550.08.10702120
CGCCGTA603000.08.099369120
GCCGTAT586050.08.036723120
GTATCAT495800.07.9506545120
GGTGGTC883300.07.8726196120
GTGGTCG814650.07.6414013118-119
GTCGCCG701200.07.5298243120
TCGCCGT682700.07.443849120
ATCTCGG1223000.07.358832120
TCGGTGG1024600.07.3549438120
CGGTGGT972200.07.313189120
CTCGGTG1095650.07.2503705120
ATCATTA476400.07.1283455120
Produced by FastQC (version 0.11.5)