FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14652698
Sequences flagged as poor quality0
Sequence length69-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG110000.010.478031120
GGTGGTC412250.08.868043120
TGGTCGC346400.08.786202120
CTCGGTG536200.08.754898120
TAGATCT689050.08.529098120
AGATCTC659600.08.500361120
TCGGTGG485150.08.438777120
TCTCGGT555350.08.323291120
CGGTGGT474350.08.251252120
GATCTCG642300.08.233967120
GGTCGCC347850.08.162821120
GTGGTCG373100.08.14135120
GTGTAGA901750.08.134975120
ATCTCGG603300.08.119475120
AGTGTAG939850.08.054297120
GAGTGTA1004250.08.027962120
AGAGTGT1084300.07.9612374120
GTAGATC889100.07.845609120
TGTAGAT914650.07.836471120
CGTATCA225300.07.5670795120
Produced by FastQC (version 0.11.5)