FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10880965
Sequences flagged as poor quality0
Sequence length59-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG52200.09.76979120
GTGGTCG188600.09.161943120
GATCTCG333000.09.008709120
GGTGGTC213750.08.757603120
TAGATCT359700.08.723645120
ATCTCGG309450.08.705479120
TGGTCGC171450.08.643631120
TCTCGGT283950.08.473041120
GGTCGCC173500.08.47234120
CTCGGTG270450.08.452297120
GAGTGTA522950.08.272025120
AGTGTAG485350.08.245321120
AGATCTC343800.08.210934118-119
TCGGTGG255100.08.067156120
GTAGATC470350.07.9725204120
GTGTAGA476500.07.819257120
CGGTGGT246850.07.5833006120
CGCCGTA154350.07.5021796120
AGAGTGT564900.07.344452118-119
AAGAGTG638600.07.3188915120
Produced by FastQC (version 0.11.5)